SubtiBank SubtiBank
bstD [2018-05-27 12:29:37]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

bstD [2018-05-27 12:29:37]

unknown
locus
BSU12410
pI
5.81
mw
17.65 kDa
protein length
154 aa Sequence Blast
gene length
462 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yjoA
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.7|Phosphorylation on a Tyr residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,313,840 → 1,314,304

    The protein

    Protein family

  • [SW|S-transferase-like (STL) superfamily] [pubmed|29451913]

    • Modification

  • phosphorylation on Tyr-150 [Pubmed|17218307]

    • Structure

  • [PDB|3DKA]

    • Expression and Regulation

    Operons

    genes
    [gene|B22075CDA06A94557DF83B3D29B7BF83E2A51EA5|bstD]
    description
    [Pubmed|22383849]

    additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A356 (yjoA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/356 NBRP B. subtilis, Japan]
  • BKE12410 (Δ[gene|B22075CDA06A94557DF83B3D29B7BF83E2A51EA5|bstD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATGATCTCCTCCATAT, downstream forward: _UP4_TAGCGTAAACAAGAAAAAAG
  • BKK12410 (Δ[gene|B22075CDA06A94557DF83B3D29B7BF83E2A51EA5|bstD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATGATCTCCTCCATAT, downstream forward: _UP4_TAGCGTAAACAAGAAAAAAG

    • References

  • 12884008,24728941,17218307,22383849